Posts by [ESL Brigade] Ssofk

1) Message boards : Number crunching : Profil Erstellen (Message 1806)
Posted 21 Nov 2009 by Profile [ESL Brigade] Ssofk
Post:
When the Profils will be fixed??? The problem is still there... .
2) Message boards : Number crunching : Upload, Download and WU Errors (Message 903)
Posted 28 Jul 2009 by Profile [ESL Brigade] Ssofk
Post:
The hlaf of my Task end with Error.
Like this : Name P9_LEU75_ILE78_LEU121_MET122_TYR125_PHE127_28058_ChemDiv_2372-2096_1248709560449777438_0
Workunit 526037
Created 27 Jul 2009 15:47:26 UTC
Sent 28 Jul 2009 8:09:20 UTC
Received 28 Jul 2009 18:07:41 UTC
Server state Over
Outcome Client error
Client state Compute error
Exit status 195 (0xc3)
Computer ID 261
Report deadline 4 Aug 2009 8:09:20 UTC
Run time 51.8594
stderr out <core_client_version>6.6.20</core_client_version>
<![CDATA[
<message>
- exit code 195 (0xc3)
</message>
<stderr_txt>
wrapper: starting
wrapper: running ../../projects/boinc.drugdiscoveryathome.com/unzip_1.011_windows_intelx86.exe (-qq -o "./MGLTools*.zip" -d ".")
wrapper: running 7za.exe (e ligand.mol2.7z)
wrapper: running ./Python25/python.exe (make_sitecustomize.py ".")
wrapper: running ./Python25/python.exe ("./MGLToolsPckgs/Support/sitecustomize.py")
wrapper: running ./Python25/python.exe ("./MGLToolsPckgs/AutoDockTools/Utilities24/prepare_ligand4.py" -l ligand.mol2 -o ligand.pdbqt)
wrapper: running ./Python25/python.exe ("./MGLToolsPckgs/AutoDockTools/Utilities24/prepare_receptor4.py" -U nphs_lps_waters -r receptor.pdb -o receptor.pdbqt)
close failed: [Errno 9] Bad file descriptor
wrapper: running ./Python25/python.exe ("./MGLToolsPckgs/AutoDockTools/Utilities24/prepare_flexreceptor4.py" -r receptor.pdbqt -g receptor_rigid.pdbqt -x receptor_flex.pdbqt -s LEU75_ILE78_LEU121_MET122_TYR125_PHE127)
wrapper: running ./Python25/python.exe ("./MGLToolsPckgs/AutoDockTools/Utilities24/prepare_gpf4.py" -l ligand.pdbqt -r receptor_rigid.pdbqt -x receptor_flex.pdbqt -p custom_parameter_file=1 -p parameter_file=AD4_parameters.dat)
wrapper: running ./Python25/python.exe ("./MGLToolsPckgs/AutoDockTools/Utilities24/prepare_dpf4.py" -l ligand.pdbqt -r receptor_rigid.pdbqt -x receptor_flex.pdbqt -p compute_unbound_extended_flag=0 -p ga_run=1)
wrapper: running ../../projects/boinc.drugdiscoveryathome.com/autogrid_1.011_windows_intelx86.exe (-p receptor_rigid.gpf -l out.glg)
wrapper: running ../../projects/boinc.drugdiscoveryathome.com/autodock_1.011_windows_intelx86.exe (-p ligand_receptor_rigid.dpf -l out.dlg)
app exit status: 0xff
called boinc_finish

</stderr_txt>
]]>

3) Message boards : Number crunching : Upload, Download and WU Errors (Message 717)
Posted 8 Jul 2009 by Profile [ESL Brigade] Ssofk
Post:
08.07.2009 17:13:28 DrugDiscovery [error] MD5 check failed for nodelete_24060_ChemDiv_8014-1066.7z
08.07.2009 17:13:28 DrugDiscovery [error] expected c043a63005d4cdd18f7b3789e3d1ca7e, got af2f73deb49030d1f1316ba32c921651
08.07.2009 17:13:28 DrugDiscovery [error] Checksum or signature error for nodelete_24060_ChemDiv_8014-1066.7z

Thats all what i get... .
4) Message boards : Number crunching : Upload, Download and WU Errors (Message 686)
Posted 27 Jun 2009 by Profile [ESL Brigade] Ssofk
Post:
Why is the differens from the CPU-Time by autodock with mgltools scripts so great? My cpu 2,021.05sec the two other´s take around 200sec.
For Example Workunit id: 216477
5) Message boards : Number crunching : Good Job, Only 50% Error's !!! (Message 640)
Posted 19 Jun 2009 by Profile [ESL Brigade] Ssofk
Post:
Ok, now by autodock with mgltools scripts the same error sometimes. For example: Task ID 655485
6) Message boards : Number crunching : Good Job, Only 50% Error's !!! (Message 639)
Posted 19 Jun 2009 by Profile [ESL Brigade] Ssofk
Post:
For the work i get now (gromacs 0.07), i can say 100% Errors. For example Task ID:653836 .

PS: autodock with mgltools scripts work´s fine.
7) Message boards : Number crunching : Unsent wu's (Message 606)
Posted 14 Jun 2009 by Profile [ESL Brigade] Ssofk
Post:
I don't like to cancel when things are pending but it was getting kind of ridiculous.


I dont want to validate the task, but it´s realy hard to lost so many hour´s of cpu-time for me. I´m crunch 6 day´s only for this project with my one PC. I had say nothing if this happend after one or two day´s, but all look´s fine and nobody say´s its wrong or to long or anythink else... . And after this Time of crunching only for this project i think its ok to say what my oppinon about is. Sry my english is bad... .
8) Message boards : Number crunching : Unsent wu's (Message 602)
Posted 14 Jun 2009 by Profile [ESL Brigade] Ssofk
Post:
I know I'm going to cancel and make the workunits shorter.


Im no problem with this but my Pending also Lost with this. And all show now Completed, can't validate. I know your a Alpha project. I say it in another thread. But i crunch with only one PC and so i lost 64 Task this are ca. 163 hours of CPU-Time and this is hard. So PLZ KEEP UP YOUR WORK, that nothing like this come again. SRY for my english.

9) Message boards : Number crunching : Can't validate? (Message 550)
Posted 5 Jun 2009 by Profile [ESL Brigade] Ssofk
Post:
I have 2 with Redundant result and 11 with Completed, can't validate Only 2 from yesterday are valid. That´s are 28 hours that i crunch for nothing. No problem it´s a Alpha-Project, but what is wrong. Some of the task are still in progress the other are abordet with redunant result. The upload was by all task i see 37MB. The Cputime was only 2-3min different to the elapsedtime. All had look fine. And now... ?

PS, Task ID Work unit ID:
redunant result:
606390 181128
606387 181127
Completed, can't validate:
606250 181082
606008 181006
605958 180989
605789 180933
605688 180899
605589 180866
605574 180861
605523 180844
604680 180571
604677 180570
604674 180569
Valid:
604682 180572
604206 180491
10) Message boards : Number crunching : gromacs 0.07 (Message 468)
Posted 28 May 2009 by Profile [ESL Brigade] Ssofk
Post:
Exactly 61,27MB i dont know how long i take to upload them. That was very big^^
11) Message boards : Number crunching : Some downloads are failing... (Message 396)
Posted 15 May 2009 by Profile [ESL Brigade] Ssofk
Post:
Same, but the first time for me.
15.05.2009 18:03:04 DrugDiscovery [error] File summary_job.txt has wrong size: expected 3160, got 0
15.05.2009 18:03:04 DrugDiscovery [error] Checksum or signature error for summary_job.txt
12) Message boards : Number crunching : long running tasks (Message 367)
Posted 14 May 2009 by Profile [ESL Brigade] Ssofk
Post:
Ok, i must abord 30 task but, i hope the rest will done in 24 hours. I get 100 task with 40min on my dual-core. And that can not reach in 24 hours. The deadline was to short and i dont know how i get this Task, maybe it returns of the short task´s before. So dont worry about it... .
13) Message boards : Number crunching : Very short Wu´s, very low Credit´s (Message 233)
Posted 11 May 2009 by Profile [ESL Brigade] Ssofk
Post:
Yes the manger are very slow, if a sending a scheduler request and some task´s are uploaded and downloaded. The manger cant display that and so are many lag´s. By the way, that was the problem that the Run - Time on my PC grow over 1min i think. I set No New Work and so no scheduler request and so the Run - Time drop around 30sec again.
14) Message boards : Number crunching : Very short Wu´s, very low Credit´s (Message 231)
Posted 11 May 2009 by Profile [ESL Brigade] Ssofk
Post:
[SETI.USA]Tank_Master you are right. But the differens between Cpu- and Runtime it´s to big i think. Sry, the Topic has maybe the wrong title, becaus my English is very bad and so i dont know how i can tell the problem´s. But i know that this is an Alpha - Project and this is the Reason for my Topic. They want (i hope) that we say what is wrong for us. Note, i dont want more cr i want more Cpu - Time^^ By the way i had (i dont really know the number) 600 task an only 9 Errors. So the test run´s fine i think.
15) Message boards : Number crunching : Very short Wu´s, very low Credit´s (Message 225)
Posted 11 May 2009 by Profile [ESL Brigade] Ssofk
Post:
Im not sure why? Now the workunits are use 4sec Cpu and have a Runtime from 1min at my PC. But im floated by Task´s, think 5000 per cpu is a little bit high. My i-net are in trouble, sometimes^^
16) Message boards : Number crunching : Very short Wu´s, very low Credit´s (Message 208)
Posted 11 May 2009 by Profile [ESL Brigade] Ssofk
Post:
Ok, Thx for fast Replay.
17) Message boards : Number crunching : Very short Wu´s, very low Credit´s (Message 204)
Posted 11 May 2009 by Profile [ESL Brigade] Ssofk
Post:
I think the Credit´s are very Low, like other Boinc-Project´s. I know the CPU-Time are ca. 5 sec but the workunit run´s ca 30 sec. In fact 1000 task a day i earn 30 cr for 1h24m CPU-Time and over 8h of Runtime this Project. Think about it.
18) Message boards : Cafe : Welcome ATAs... (Message 163)
Posted 9 May 2009 by Profile [ESL Brigade] Ssofk
Post:
Hi All!!! Let´s Crunch ^^
19) Message boards : Number crunching : Pendings... (Message 157)
Posted 8 May 2009 by Profile [ESL Brigade] Ssofk
Post:
11K and rising :)

ack, it's alpha after all


it´s normal you need the half time for one wu than my machine.
For example: Workunit 31384

But no Problem they crunch only for this project. So im at the end of my wu´s Saturday night.



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