Posts by [BOINC@Poland]goofyx

1) Message boards : Number crunching : Gromacs GPU work units now available (Message 4965)
Posted 14 Oct 2017 by [BOINC@Poland]goofyx
Post:
Gromacs/GMC is still is still beta version
2) Message boards : News : Maintenance break (Message 4963)
Posted 14 Oct 2017 by [BOINC@Poland]goofyx
Post:
All work units appear to be drained

That's correct.
In next 2-3 days I will start next series of 5.5M WU for each vina and smina.
At this moment my storege server finishing analyzing 11M WU from last series.
3) Message boards : Number crunching : Smina for mol2 (Message 4953)
Posted 6 Oct 2017 by [BOINC@Poland]goofyx
Post:
There are the same problems of this morning; error is:
<core_client_version>7.2.42</core_client_version>
<![CDATA[
<message>
WU download error: couldn't get input files:
<file_xfer_error>
<file_name>smina-mol2_SM002b_config-4l2y_zinc15-00066_GFAAMN.xaa-ligand-2854.pdbqt_19943_59684.in</file_name>
<error_code>-119 (md5 checksum failed for file)</error_code>
<error_message>MD5 check failed</error_message>
</file_xfer_error>

</message>
]]>

I found problem <- it's my mistake and I am sorry for that.
At this moment for every app (vina and simna-mol2) I had to start 2 WU generators to keep up sending tasks to hosts <- But for smina-mol2 both generators overlapped tasks from one directory and create about 50k bad wu's.

I am really sorry for that. Last night I split both (vina and smina) sources directory for every generators.
4) Message boards : Number crunching : Smina for mol2 (Message 4950)
Posted 5 Oct 2017 by [BOINC@Poland]goofyx
Post:
many problems with download of Wu Smina for Mol.

I will check it
5) Message boards : Number crunching : Smina for mol2 (Message 4949)
Posted 5 Oct 2017 by [BOINC@Poland]goofyx
Post:
And I observe that the quantity of the available WUs go down fast. We will run out in two weeks?

We have enought smina-mol2 WU's.
Acctual series has 1,2kk generated and I am starting to generate next serie with 5,5kk of WU.
Number of ready to sent wu on the server drop down durring last 24-36 hours because I have some maintance breake on storage system <- at this moment 2 generators work for smina-mol2 and 2 generators for vina.
6) Message boards : Number crunching : validators NOT running! (Message 4937)
Posted 27 Sep 2017 by [BOINC@Poland]goofyx
Post:
Yeah I've noticed that too when I look at the Sever Status.

The validators seem not to be running and I have a number of wus validation pending.

that's true I need to stoped validators and assimilators for their maintance.
Don't worry you will get your credits.
7) Message boards : News : Maintenance break (Message 4921)
Posted 15 Aug 2017 by [BOINC@Poland]goofyx
Post:
I have a windows 10 and a Linux box. Both are working great but now I need to click on "update" under Projects to get new tasks. with the short tasks this is a burden.

At this moment it's enought ready to send Wu's that this problem should be solved
8) Message boards : News : Maintenance break (Message 4919)
Posted 13 Aug 2017 by [BOINC@Poland]goofyx
Post:
Why invalid all the works?


I am checking it now


About 20k WU was generated as corrupted <- I had to canncel it.
I make copy of hem and i will check what is wrong with them because I have to know for future series.

I am VERY sorry for that kind of situation.
9) Message boards : News : Maintenance break (Message 4918)
Posted 13 Aug 2017 by [BOINC@Poland]goofyx
Post:
Why invalid all the works?


I am checking it now
10) Message boards : News : VERY IMPORTANT: Vina support for ARM (Message 4906)
Posted 12 Aug 2017 by [BOINC@Poland]goofyx
Post:
If you would like to crunch VINA app on ARM system (like armbian on odroid)


Do you plan a release also for Android (smartphone, tablet, etc)??


I can try to compile that in next 2-3 weekes <- after we make some other jobs with token on the server.
11) Message boards : News : Maintenance break (Message 4902)
Posted 10 Aug 2017 by [BOINC@Poland]goofyx
Post:
ok, I started all boinc deamons and for now everythink running ok.
12) Message boards : News : Maintenance break (Message 4900)
Posted 9 Aug 2017 by [BOINC@Poland]goofyx
Post:
In next 12-24 we will have some maintenance break
13) Message boards : Number crunching : Smina for mol2 (Message 4899)
Posted 9 Aug 2017 by [BOINC@Poland]goofyx
Post:
That is very nice, but on my Linux machine (i5-3550), they are too short, running only about 2 or 3 minutes.
Therefore, my BoincTasks log fills up, and I have to reduce the number of days that it monitors.

So these seem to be sized for the portable devices (Android or whatever).
Could you make some bigger ones for the desktop users?


At this moment we can't. We know it's short.
It does not depend on us ( boinc admins) our science team prepare that kind of task and we just generate WU from it.
14) Message boards : Number crunching : Smina for mol2 (Message 4897)
Posted 8 Aug 2017 by [BOINC@Poland]goofyx
Post:
smina_mol2 it's not beta app.


I have very good news for everybody who would like to crunch some smina WU's....
I started to generated big serie of that WU <- only about 10M :)

At this moment smina has only arm (odroid, raspberry pi) app but in next 2-3 days linux version should be supported
15) Message boards : Number crunching : Smina for mol2 (Message 4888)
Posted 2 Aug 2017 by [BOINC@Poland]goofyx
Post:
mol2 out of work already. :(

yes... smina_mol2 has very short series <- about 50k WU's per config and we crunch two cofigs.
But vina now have serie of 11kk WU's so we have have much work to do.
16) Message boards : News : VERY IMPORTANT: Vina support for ARM (Message 4884)
Posted 1 Aug 2017 by [BOINC@Poland]goofyx
Post:
If you would like to crunch VINA app on ARM system (like armbian on odroid) please install required library by this command:

apt-get install autodock-vina


After it you are ready to go :)
17) Message boards : Number crunching : Smina for mol2 (Message 4883)
Posted 1 Aug 2017 by [BOINC@Poland]goofyx
Post:
Will this application be coming to Windows? (Sorry if this is answered somewhere else)


At this moment we have no plan to make smina on windows
18) Message boards : Number crunching : Smina for mol2 (Message 4877)
Posted 31 Jul 2017 by [BOINC@Poland]goofyx
Post:
smina_mol2 is start again and right now should be ok
19) Message boards : News : DrugDiscovery@Home is back (Message 4861)
Posted 12 Jul 2017 by [BOINC@Poland]goofyx
Post:
Do you have any old task from DD@H on the list before start processing new one?
20) Message boards : Number crunching : Windows Work Units? (Message 4819)
Posted 18 Mar 2017 by [BOINC@Poland]goofyx
Post:
305659 wus ready to send, all Linux!!

None for Windows?

smina_mol2 is only for linux 64 and arm 32/64.

But our science team prepera somethink big for Vina (windows) too. At this moment I am start generating obout 5M WU.... and this is not over...
In next week they promise me to prepare more that 20M jobs to work :)

So both smina_mol2 and vina should has full of work.

I hope acctual generating vina WU's it's enought to today evening, because I am still uploading new tasks :)


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