Library Dependencies

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Augustine
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Message 1761 - Posted: 16 Nov 2009, 22:09:48 UTC

There seems to be a library dependency that creates problems on a production system, therefore one which cannot be meddled with easily:

mdrun_0.208_x86_64-pc-linux-gnu: /lib/libgcc_s.so.1: version `GCC_4.2.0' not found


All that's needed is to link libstdc++ staticaly, as explained here.

HTH
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Profile Jack Shultz
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Message 1766 - Posted: 17 Nov 2009, 11:54:57 UTC - in response to Message 1761.  

I've tried to build it on several occasions, but always failed. If you can provide some assistance with this I would appreciate it.
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Augustine
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Message 1771 - Posted: 17 Nov 2009, 15:47:45 UTC - in response to Message 1766.  

I've tried to build it on several occasions, but always failed. If you can provide some assistance with this I would appreciate it.

Absolutely. Can I see the makefile?

TIA

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Profile Jack Shultz
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Message 1774 - Posted: 17 Nov 2009, 21:32:40 UTC - in response to Message 1771.  

I will send you a PM tonight with more details. I need help with the following

1) Building a compatible wrapper - I have a code update that supports progress bar monitoring
2) test current autodock binaries on this new wrapper
3) test current mdrun binaries on this new wrapper

If we have errors on 2 & 3 we need to build the support.
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Message boards : Number crunching : Library Dependencies


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